[Aida-compute-users] AIDA days: Technical workshop on hyperparameter optimization and distributed training (October 26 on Zoom)

Tue Sep 20 11:51:35 CEST 2022

Dear AIDA members,

Tomorrow we will arrange the AIDA-days in Uppsala. The next AIDA-day October 26 will be on Zoom with the theme: Technical workshop on hyperparameter optimization and distributed training.

AIDA invites our technical community to an AIDA-day where we will deep dive into hot topics in AI training. Our keynote speaker, Veronika Cheplygina, IT University Copenhagen DK, is invited to present her recent paper on methodological failures in ML for medical imaging, and to discuss her interesting work on tackling limited access to labeled data.

We continue with a workshop structured to cover two important aspects of training deep neural networks. The workshop tutor Erik Ylipää, ENCCS/RISE, will guide us through the two sessions: "Hyperparameter optimization using Optuna" and "Distributed PyTorch training: single and multiple node training". The workshop will mostly follow a "code-along" structure with material distributed in advance. You are welcome to prepare questions, both general and specific in detail, to discuss, break down and hopefully problem-solve.

For those of you who are not technical experts we recommend you take part in AIDA's regular internal meeting and listen to the keynote presentation.

Further reads: https://www.nature.com/articles/s41746-022-00592-y<https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.nature.com%2Farticles%2Fs41746-022-00592-y&data=05%7C01%7Ccaroline.bivik.stadler%40liu.se%7C8602c5731f0e40aab3a108da9ad85279%7C913f18ec7f264c5fa816784fe9a58edd%7C0%7C0%7C637992551250579052%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=%2FNLPpJv8P%2B%2BNu5siTTeX0DPlnII7Be0USY8hQtU2zvU%3D&reserved=0> - Veronika Cheplygina

Date and time: October 26, 11.00-17.00 (Zoom).
11.00-12.00 Internal meeting
13.00-13.45 Keynote Veronika Cheplygina
13.45-17.00 Technical workshop
Program: please find attached and on "AIDA confluence"

Please register at: https://forms.office.com/r/emkTX7BsFA<https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fforms.office.com%2Fr%2FemkTX7BsFA&data=05%7C01%7Ccaroline.bivik.stadler%40liu.se%7C8602c5731f0e40aab3a108da9ad85279%7C913f18ec7f264c5fa816784fe9a58edd%7C0%7C0%7C637992551250579052%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=jpRHXy1%2FS8CMGThTCExocIRx%2Fc%2B0GDcOw%2BDaRaVm%2Fqg%3D&reserved=0>

Zoom link will be distributed to registered participants prior to the meeting

Most Welcome!

__________________________________________________________________________________________________________________________________________

AIDA is recruiting

  *   Research engineer in data sharing: https://datahub.aida.scilifelab.se/jobs/2022-10-03-data-sharing-engineer/<https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fdatahub.aida.scilifelab.se%2Fjobs%2F2022-10-03-data-sharing-engineer%2F&data=05%7C01%7Ccaroline.bivik.stadler%40liu.se%7C8602c5731f0e40aab3a108da9ad85279%7C913f18ec7f264c5fa816784fe9a58edd%7C0%7C0%7C637992551250579052%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=F%2FV5uMdJBGj4HzUQUdo0TAL2pQg9bID%2FrMEdGvYxeZ4%3D&reserved=0>
  *   Research engineer in service development and operations: https://datahub.aida.scilifelab.se/jobs/2022-10-03-devops-engineer/<https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fdatahub.aida.scilifelab.se%2Fjobs%2F2022-10-03-devops-engineer%2F&data=05%7C01%7Ccaroline.bivik.stadler%40liu.se%7C8602c5731f0e40aab3a108da9ad85279%7C913f18ec7f264c5fa816784fe9a58edd%7C0%7C0%7C637992551250735705%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=5ZRGPA6jk6IoFedkoS496SfC%2BrJ7bOU%2BXa16q8n6YHE%3D&reserved=0>

Welcome to apply or to help us reach good recruits, for example by sharing our LinkedIn ads (sharing<https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.linkedin.com%2Fjobs%2Fview%2F3266565946%2F%3FrefId%3DZ2xEFZ4NgURAXLi0PMyXuw%253D%253D&data=05%7C01%7Ccaroline.bivik.stadler%40liu.se%7C8602c5731f0e40aab3a108da9ad85279%7C913f18ec7f264c5fa816784fe9a58edd%7C0%7C0%7C637992551250735705%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=82JRgeUuzMwnlarVKTz%2FxawNo5o6n%2BoS0mdVzR%2FtEMo%3D&reserved=0>, devops<https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.linkedin.com%2Fjobs%2Fview%2F3266569570%2F%3FrefId%3DABF4aJOSjjyZo%252F98gnommw%253D%253D&data=05%7C01%7Ccaroline.bivik.stadler%40liu.se%7C8602c5731f0e40aab3a108da9ad85279%7C913f18ec7f264c5fa816784fe9a58edd%7C0%7C0%7C637992551250735705%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=D06w9zmc0BoDnhL8Z%2B5ZvHoR6w9UYJ%2BEw0cb9M6eQO8%3D&reserved=0>).

New chance to make proposals to AIDA

  *   Propose an Innovation project<https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fmedtech4health.se%2Fen%2Faida-arena%2Fapply-for-innovation-project%2F&data=05%7C01%7Ccaroline.bivik.stadler%40liu.se%7C8602c5731f0e40aab3a108da9ad85279%7C913f18ec7f264c5fa816784fe9a58edd%7C0%7C0%7C637992551250735705%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=sc0%2FIlrzZiSqwxh8CpD%2BQL%2FOpDAwp6BhD6jN93KTF%2Bw%3D&reserved=0>: A project to develop AI-based decision support in imaging diagnostics. AIDA welcome proposals from groups of researchers and innovators from both academia and industry, together with a close collaboration with clinical counterparts. Project size: ~1000 kSEK.
  *   Propose a Clinical Fellowship Project:<https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fmedtech4health.se%2Fen%2Faida-arena%2Fapply-for-clinical-fellowship%2F&data=05%7C01%7Ccaroline.bivik.stadler%40liu.se%7C8602c5731f0e40aab3a108da9ad85279%7C913f18ec7f264c5fa816784fe9a58edd%7C0%7C0%7C637992551250735705%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=ErTYy9dYibqJN9otxqtyaxpJ7y%2BWblf%2FgghdSk1SVIY%3D&reserved=0> Care provider employees can engage in AI competence development in the form of a fellowship project. Project size: 50-400 kSEK.
  *   Propose a Clinical Evaluation Project<https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fmedtech4health.se%2Faida-en%2Fapply-for-clinical-evaluation%2F&data=05%7C01%7Ccaroline.bivik.stadler%40liu.se%7C8602c5731f0e40aab3a108da9ad85279%7C913f18ec7f264c5fa816784fe9a58edd%7C0%7C0%7C637992551250735705%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=dqEbGp6bbP0EGsN9FxWOZFLUCTyQH8Br8Qf%2FUahcE7w%3D&reserved=0>: It can be difficult for healthcare providers to get a grip on whether the AI solutions available on the market can make a real difference in their workflows. AIDA's project type Clinical Evaluation aims to assist care providers in crossing that threshold. Project size: 100-300 kSEK.
The deadline for this round is November 1, 2022.

Upcoming AIDA Events 2022

  *   September 21-22 - AIDA days, Uppsala
  *   October 26 - AIDA days, technical workshop (Zoom)
  *   November 22-23 - AIDA days, Linköping CMIV

  *   November 9-11 - AIDA AI course for clinicians https://forms.office.com/r/6rYMjsmfVG<https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fforms.office.com%2Fr%2F6rYMjsmfVG&data=05%7C01%7Ccaroline.bivik.stadler%40liu.se%7C8602c5731f0e40aab3a108da9ad85279%7C913f18ec7f264c5fa816784fe9a58edd%7C0%7C0%7C637992551250735705%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=tgba5QK07Xzt67fJQgSKmbfzFvqE1HviCwNnjsaLyJU%3D&reserved=0>

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If you do not want to receive any further e-mails from AIDA. Send an email to aida-info at medtech4health.se<mailto:aida-info at medtech4health.se> to unsubscribe.

Best regards
Caroline Bivik Stadler, PhD
AIDA project manager
[Linköping University]
Center for Medical Image Science and Visualization
SE-581 85 Linköping
Mobile: +46 (0)70-7643 0 13
Visiting address: Linköping University Hospital, floor 11
Please visit us at liu.se<https://liu.se/>

E-mailing Linköping University will result in Linköping University processing your personal data. Find more information on how this is done at https://liu.se/en/article/integritetspolicy-liu

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